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python-biopython  1.60
Namespaces | Functions | Variables
test_GenBank.py File Reference

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Namespaces

namespace  test_GenBank

Functions

def test_GenBank.do_comparison
def test_GenBank.t_write_format
def test_GenBank.t_cleaning_features
def test_GenBank.t_ensembl_locus

Variables

tuple test_GenBank.gb_file_dir = os.path.join(os.getcwd(), 'GenBank')
list test_GenBank.test_files
list test_GenBank.write_format_files
list test_GenBank.files_to_parse = []
tuple test_GenBank.feature_parser = GenBank.FeatureParser(debug_level = 0)
tuple test_GenBank.record_parser = GenBank.RecordParser(debug_level = 0)
list test_GenBank.all_parsers = [feature_parser, record_parser]
tuple test_GenBank.handle = open(filename, 'r')
tuple test_GenBank.iterator = GenBank.Iterator(handle, parser)
tuple test_GenBank.cur_record = iterator.next()
tuple test_GenBank.ann_keys = cur_record.annotations.keys()