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python-biopython  1.60
Classes | Namespaces | Functions | Variables
test_Emboss.py File Reference

Go to the source code of this file.

Classes

class  test_Emboss.SeqRetSeqIOTests
class  test_Emboss.SeqRetAlignIOTests
class  test_Emboss.PairwiseAlignmentTests
class  test_Emboss.TranslationTests

Namespaces

namespace  test_Emboss

Functions

def test_Emboss.get_emboss_version
def test_Emboss.emboss_convert
def test_Emboss.emboss_piped_SeqIO_convert
def test_Emboss.emboss_piped_AlignIO_convert
def test_Emboss.compare_records
def test_Emboss.compare_alignments
def test_Emboss.emboss_translate
def test_Emboss.check_translation
def test_Emboss.clean_up

Variables

list test_Emboss.exes_wanted
tuple test_Emboss.exes = dict()
list test_Emboss.path = os.environ["EMBOSS_ROOT"]
tuple test_Emboss.output = commands.getoutput("%s -help" % name)
tuple test_Emboss.emboss_version = get_emboss_version()
tuple test_Emboss.runner = unittest.TextTestRunner(verbosity = 2)