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python-biopython  1.60
Classes | Variables
test_Prank_tool Namespace Reference

Classes

class  PrankApplication
class  PrankConversion

Variables

 prank_exe = None
list prog_files = os.environ["PROGRAMFILES"]
list likely_dirs
tuple output = commands.getoutput("prank")
tuple runner = unittest.TextTestRunner(verbosity = 2)

Detailed Description

Unittests for Bio.Align.Applications interface for PRANK

This code is part of the Biopython distribution and governed by its
license.  Please see the LICENSE file that should have been included
as part of this package.

Variable Documentation

Initial value:
00001 ["", #Current dir
00002                    prog_files,
00003                    os.path.join(prog_files,"Prank")]

Definition at line 32 of file test_Prank_tool.py.

tuple test_Prank_tool.output = commands.getoutput("prank")

Definition at line 43 of file test_Prank_tool.py.

Definition at line 22 of file test_Prank_tool.py.

string test_Prank_tool.prog_files = os.environ["PROGRAMFILES"]

Definition at line 26 of file test_Prank_tool.py.

tuple test_Prank_tool.runner = unittest.TextTestRunner(verbosity = 2)

Definition at line 199 of file test_Prank_tool.py.