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python-biopython  1.60
Classes | Variables
test_Muscle_tool Namespace Reference

Classes

class  MuscleApplication
class  SimpleAlignTest

Variables

 muscle_exe = None
list prog_files = os.environ["PROGRAMFILES"]
list likely_dirs
tuple output = commands.getoutput("muscle -version")
tuple runner = unittest.TextTestRunner(verbosity = 2)

Variable Documentation

Initial value:
00001 ["", #Current dir
00002                    prog_files,
00003                    os.path.join(prog_files,"Muscle3.6"),
00004                    os.path.join(prog_files,"Muscle3.7"),
00005                    os.path.join(prog_files,"Muscle3.8"),
00006                    os.path.join(prog_files,"Muscle3.9"),
00007                    os.path.join(prog_files,"Muscle")]

Definition at line 32 of file test_Muscle_tool.py.

Definition at line 21 of file test_Muscle_tool.py.

tuple test_Muscle_tool.output = commands.getoutput("muscle -version")

Definition at line 47 of file test_Muscle_tool.py.

string test_Muscle_tool.prog_files = os.environ["PROGRAMFILES"]

Definition at line 25 of file test_Muscle_tool.py.

tuple test_Muscle_tool.runner = unittest.TextTestRunner(verbosity = 2)

Definition at line 363 of file test_Muscle_tool.py.