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python-biopython  1.60
Classes | Functions | Variables
Bio.Phylo.PhyloXML Namespace Reference

Classes

class  PhyloXMLWarning
class  PhyloElement
class  Phyloxml
class  Other
class  Phylogeny
class  Clade
class  BranchColor
class  Accession
class  Annotation
class  BinaryCharacters
class  CladeRelation
class  Confidence
class  Date
class  Distribution
class  DomainArchitecture
class  Events
class  Id
class  MolSeq
class  Point
class  Polygon
class  Property
class  ProteinDomain
class  Reference
class  Sequence
class  SequenceRelation
class  Taxonomy
class  Uri

Functions

def _check_str

Variables

string __docformat__ = "restructuredtext en"

Function Documentation

def Bio.Phylo.PhyloXML._check_str (   text,
  testfunc 
) [private]
Check a string using testfunc, and warn if there's no match.

Definition at line 35 of file PhyloXML.py.

00035 
00036 def _check_str(text, testfunc):
00037     """Check a string using testfunc, and warn if there's no match."""
00038     if text is not None and not testfunc(text):
00039         warnings.warn("String %s doesn't match the given regexp" % text,
00040                       PhyloXMLWarning, stacklevel=2)
00041 
00042 
00043 # Core elements

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Variable Documentation

string Bio.Phylo.PhyloXML.__docformat__ = "restructuredtext en"

Definition at line 15 of file PhyloXML.py.