Back to index

python-biopython  1.60
Classes | Variables
Bio.PDB.Superimposer Namespace Reference

Classes

class  Superimposer

Variables

tuple p = PDBParser()
tuple s1 = p.get_structure("FIXED", sys.argv[1])
tuple fixed = Selection.unfold_entities(s1, "A")
tuple s2 = p.get_structure("MOVING", sys.argv[1])
tuple moving = Selection.unfold_entities(s2, "A")
tuple rot = numpy.identity(3)
tuple tran = numpy.array((1.0, 2.0, 3.0), 'f')
tuple sup = Superimposer()

Variable Documentation

Definition at line 66 of file Superimposer.py.

Definition at line 69 of file Superimposer.py.

tuple Bio.PDB.Superimposer.p = PDBParser()

Definition at line 64 of file Superimposer.py.

tuple Bio.PDB.Superimposer.rot = numpy.identity(3)

Definition at line 71 of file Superimposer.py.

tuple Bio.PDB.Superimposer.s1 = p.get_structure("FIXED", sys.argv[1])

Definition at line 65 of file Superimposer.py.

tuple Bio.PDB.Superimposer.s2 = p.get_structure("MOVING", sys.argv[1])

Definition at line 68 of file Superimposer.py.

Definition at line 77 of file Superimposer.py.

tuple Bio.PDB.Superimposer.tran = numpy.array((1.0, 2.0, 3.0), 'f')

Definition at line 72 of file Superimposer.py.