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python-biopython  1.60
Classes | Variables
Bio.PDB.StructureAlignment Namespace Reference


class  StructureAlignment


tuple fa =[1]), "fasta", generic_protein)
list pdb_file1 = sys.argv[2]
list pdb_file2 = sys.argv[3]
tuple p = PDBParser()
tuple s1 = p.get_structure('1', pdb_file1)
tuple s2 = p.get_structure('2', pdb_file2)
list m1 = s1[0]
list m2 = s2[0]
tuple al = StructureAlignment(fa, m1, m2)

Variable Documentation

Definition at line 130 of file

tuple Bio.PDB.StructureAlignment.fa =[1]), "fasta", generic_protein)

Definition at line 115 of file

Definition at line 127 of file

Definition at line 128 of file

tuple Bio.PDB.StructureAlignment.p = PDBParser()

Definition at line 121 of file

Definition at line 117 of file

Definition at line 118 of file

tuple Bio.PDB.StructureAlignment.s1 = p.get_structure('1', pdb_file1)

Definition at line 122 of file

tuple Bio.PDB.StructureAlignment.s2 = p.get_structure('2', pdb_file2)

Definition at line 124 of file