Back to index

python-biopython  1.60
Public Member Functions | Public Attributes Class Reference

List of all members.

Public Member Functions

def __init__

Public Attributes


Detailed Description

AF lines, define the location of the read within the contig.

Note attribute coru is short for complemented (C) or uncomplemented (U),
since the strand information is stored in an ACE file using either the
C or U character.

Definition at line 106 of file

Constructor & Destructor Documentation

def (   self,
  line = None 

Definition at line 113 of file

00114     def __init__(self, line=None):
00116         self.coru=None
00117         self.padded_start=None
00118         if line:
00119             header = line.split()
00120    = header[1]
00121             self.coru = header[2]
00122             self.padded_start = int(header[3])

Member Data Documentation

Definition at line 115 of file

Definition at line 114 of file

Definition at line 116 of file

The documentation for this class was generated from the following file: