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python-biopython  1.60
Public Member Functions | Public Attributes
Bio.Phylo.PhyloXML.Accession Class Reference
Inheritance diagram for Bio.Phylo.PhyloXML.Accession:
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List of all members.

Public Member Functions

def __init__
def __str__
def __repr__

Public Attributes

 value
 source

Detailed Description

Captures the local part in a sequence identifier.

Example: In ``UniProtKB:P17304``, the Accession instance attribute ``value``
is 'P17304' and the ``source`` attribute is 'UniProtKB'.

Definition at line 433 of file PhyloXML.py.


Constructor & Destructor Documentation

def Bio.Phylo.PhyloXML.Accession.__init__ (   self,
  value,
  source 
)

Definition at line 439 of file PhyloXML.py.

00439 
00440     def __init__(self, value, source):
00441         self.value = value
00442         self.source = source


Member Function Documentation

def Bio.Phylo.BaseTree.TreeElement.__repr__ (   self) [inherited]
Show this object's constructor with its primitive arguments.

Definition at line 216 of file BaseTree.py.

00216 
00217     def __repr__(self):
00218         """Show this object's constructor with its primitive arguments."""
00219         def pair_as_kwarg_string(key, val):
00220             if isinstance(val, basestring):
00221                 return "%s='%s'" % (key, _sugar.trim_str(unicode(val)))
00222             return "%s=%s" % (key, val)
00223         return u'%s(%s)' % (self.__class__.__name__,
00224                             ', '.join(pair_as_kwarg_string(key, val)
00225                                   for key, val in self.__dict__.iteritems()
00226                                   if val is not None and
00227                                   type(val) in (str, int, float, bool, unicode)
00228                                   ))

Show the class name and an identifying attribute.

Definition at line 443 of file PhyloXML.py.

00443 
00444     def __str__(self):
00445         """Show the class name and an identifying attribute."""
00446         return '%s:%s' % (self.source, self.value)
00447 


Member Data Documentation

Definition at line 441 of file PhyloXML.py.

Definition at line 440 of file PhyloXML.py.


The documentation for this class was generated from the following file: