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python-biopython  1.60
Public Member Functions | Public Attributes
Bio.Motif.Parsers.MEME.MEMERecord Class Reference

List of all members.

Public Member Functions

def __init__
def get_motif_by_name

Public Attributes

 motifs
 version
 datafile
 command
 alphabet
 sequence_names

Detailed Description

A class for holding the results of a MEME run.

A MEMERecord is an object that holds the results from running
MEME. It implements no methods of its own.

Definition at line 147 of file MEME.py.


Constructor & Destructor Documentation

__init__ (self)

Definition at line 154 of file MEME.py.

00154 
00155     def __init__ (self):
00156         """__init__ (self)"""
00157         self.motifs = []
00158         self.version = ""
00159         self.datafile = ""
00160         self.command = ""
00161         self.alphabet = None
00162         self.sequence_names = []
        

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Member Function Documentation

Definition at line 163 of file MEME.py.

00163 
00164     def get_motif_by_name (self, name):
00165         for m in self.motifs:
00166             if m.name == name:
00167                 return m
00168 
00169 
00170 # Everything below is private
00171 


Member Data Documentation

Definition at line 160 of file MEME.py.

Definition at line 159 of file MEME.py.

Definition at line 158 of file MEME.py.

Definition at line 156 of file MEME.py.

Definition at line 161 of file MEME.py.

Definition at line 157 of file MEME.py.


The documentation for this class was generated from the following file: