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python-biopython  1.60
Public Member Functions | Public Attributes
Bio.Motif.Parsers.MAST.Record Class Reference

List of all members.

Public Member Functions

def __init__
def get_motif_by_name

Public Attributes

 sequences
 version
 database
 diagrams
 alphabet
 motifs

Detailed Description

The class for holding the results from a MAST run.

A MAST.Record holds data about matches between motifs and sequences.
The motifs held by the Record are objects of the class MEMEMotif.

Methods:
get_motif_by_name (motif_name): returns a MEMEMotif with the given
name.

Definition at line 11 of file MAST.py.


Constructor & Destructor Documentation

Definition at line 22 of file MAST.py.

00022 
00023     def __init__ (self):
00024         self.sequences = []
00025         self.version = ""
00026         self.database = ""
00027         self.diagrams = {}
00028         self.alphabet = None
00029         self.motifs = []
    

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Member Function Documentation

Definition at line 30 of file MAST.py.

00030 
00031     def get_motif_by_name (self, name):
00032         for m in self.motifs:
00033             if m.name == name:
00034                 return m


Member Data Documentation

Definition at line 27 of file MAST.py.

Definition at line 25 of file MAST.py.

Definition at line 26 of file MAST.py.

Definition at line 28 of file MAST.py.

Definition at line 23 of file MAST.py.

Definition at line 24 of file MAST.py.


The documentation for this class was generated from the following file: