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python-biopython  1.60
Public Member Functions | Public Attributes
Bio.Emboss.Primer3.Primers Class Reference

List of all members.

Public Member Functions

def __init__
def __len__

Public Attributes

 size
 forward_seq
 forward_start
 forward_length
 forward_tm
 forward_gc
 reverse_seq
 reverse_start
 reverse_length
 reverse_tm
 reverse_gc
 internal_seq
 internal_start
 internal_length
 internal_tm
 internal_gc

Detailed Description

A primer set designed by Primer3.

Members:

size - length of product, note you can use len(primer) as an
       alternative to primer.size

forward_seq
forward_start
forward_length
forward_tm
forward_gc

reverse_seq
reverse_start
reverse_length
reverse_tm
reverse_gc

internal_seq
internal_start
internal_length
internal_tm
internal_gc

Definition at line 35 of file Primer3.py.


Constructor & Destructor Documentation

Definition at line 61 of file Primer3.py.

00061 
00062     def __init__(self):
00063         self.size = 0
00064         self.forward_seq = ""
00065         self.forward_start = 0
00066         self.forward_length = 0
00067         self.forward_tm = 0.0
00068         self.forward_gc = 0.0
00069         self.reverse_seq = ""
00070         self.reverse_start = 0
00071         self.reverse_length = 0
00072         self.reverse_tm = 0.0
00073         self.reverse_gc = 0.0
00074         self.internal_seq = ""
00075         self.internal_start = 0
00076         self.internal_length = 0
00077         self.internal_tm = 0.0
00078         self.internal_gc = 0.0

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Member Function Documentation

Length of the primer product (i.e. product size).

Definition at line 79 of file Primer3.py.

00079 
00080     def __len__(self):
00081         """Length of the primer product (i.e. product size)."""
00082         return self.size
00083 


Member Data Documentation

Definition at line 67 of file Primer3.py.

Definition at line 65 of file Primer3.py.

Definition at line 63 of file Primer3.py.

Definition at line 64 of file Primer3.py.

Definition at line 66 of file Primer3.py.

Definition at line 77 of file Primer3.py.

Definition at line 75 of file Primer3.py.

Definition at line 73 of file Primer3.py.

Definition at line 74 of file Primer3.py.

Definition at line 76 of file Primer3.py.

Definition at line 72 of file Primer3.py.

Definition at line 70 of file Primer3.py.

Definition at line 68 of file Primer3.py.

Definition at line 69 of file Primer3.py.

Definition at line 71 of file Primer3.py.

Definition at line 62 of file Primer3.py.


The documentation for this class was generated from the following file: