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python-biopython  1.60
Public Member Functions | Public Attributes
Bio.Blast.Record.Alignment Class Reference

List of all members.

Public Member Functions

def __init__
def __str__

Public Attributes

 title
 hit_id
 hit_def
 length
 hsps

Detailed Description

Stores information about one hit in the alignments section.

Members:
title      Name.
hit_id     Hit identifier. (str)
hit_def    Hit definition. (str)
length     Length.  (int)
hsps       A list of HSP objects.

Definition at line 75 of file Record.py.


Constructor & Destructor Documentation

Definition at line 86 of file Record.py.

00086 
00087     def __init__(self):
00088         self.title = ''
00089         self.hit_id = ''
00090         self.hit_def = ''
00091         self.length = None
        self.hsps = []

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Member Function Documentation

Definition at line 92 of file Record.py.

00092 
00093     def __str__(self):
00094         lines = self.title.split('\n')
00095         lines.append("Length = %s\n" % self.length)
00096         return '\n           '.join(lines)

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Member Data Documentation

Definition at line 89 of file Record.py.

Definition at line 88 of file Record.py.

Definition at line 91 of file Record.py.

Definition at line 90 of file Record.py.

Definition at line 87 of file Record.py.


The documentation for this class was generated from the following file: