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python-biopython  1.60
Classes | Namespaces | Functions | Variables
ResidueDepth.py File Reference

Go to the source code of this file.

Classes

class  Bio.PDB.ResidueDepth.ResidueDepth

Namespaces

namespace  Bio.PDB.ResidueDepth

Functions

def Bio.PDB.ResidueDepth._read_vertex_array
def Bio.PDB.ResidueDepth.get_surface
def Bio.PDB.ResidueDepth.min_dist
def Bio.PDB.ResidueDepth.residue_depth
def Bio.PDB.ResidueDepth.ca_depth

Variables

tuple Bio.PDB.ResidueDepth.p = PDBParser()
tuple Bio.PDB.ResidueDepth.s = p.get_structure("X", sys.argv[1])
list Bio.PDB.ResidueDepth.model = s[0]
tuple Bio.PDB.ResidueDepth.rd = ResidueDepth(model, sys.argv[1])