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python-biopython  1.60
Classes | Namespaces | Functions | Variables
QualityIO.py File Reference

Go to the source code of this file.

Classes

class  Bio.SeqIO.QualityIO.FastqPhredWriter
class  Bio.SeqIO.QualityIO.QualPhredWriter
class  Bio.SeqIO.QualityIO.FastqSolexaWriter
class  Bio.SeqIO.QualityIO.FastqIlluminaWriter

Namespaces

namespace  Bio.SeqIO.QualityIO

Functions

def Bio.SeqIO.QualityIO.solexa_quality_from_phred
def Bio.SeqIO.QualityIO.phred_quality_from_solexa
def Bio.SeqIO.QualityIO._get_phred_quality
def Bio.SeqIO.QualityIO._get_sanger_quality_str
def Bio.SeqIO.QualityIO._get_illumina_quality_str
def Bio.SeqIO.QualityIO._get_solexa_quality_str
def Bio.SeqIO.QualityIO.FastqGeneralIterator
def Bio.SeqIO.QualityIO.FastqPhredIterator
def Bio.SeqIO.QualityIO.FastqSolexaIterator
def Bio.SeqIO.QualityIO.FastqIlluminaIterator
def Bio.SeqIO.QualityIO.QualPhredIterator
def Bio.SeqIO.QualityIO.PairedFastaQualIterator
def Bio.SeqIO.QualityIO._test

Variables

string Bio.SeqIO.QualityIO.__docformat__ = "epytext en"
int Bio.SeqIO.QualityIO.SANGER_SCORE_OFFSET = 33
int Bio.SeqIO.QualityIO.SOLEXA_SCORE_OFFSET = 64
tuple Bio.SeqIO.QualityIO._phred_to_sanger_quality_str
tuple Bio.SeqIO.QualityIO._solexa_to_sanger_quality_str
tuple Bio.SeqIO.QualityIO._phred_to_illumina_quality_str
tuple Bio.SeqIO.QualityIO._solexa_to_illumina_quality_str
tuple Bio.SeqIO.QualityIO._solexa_to_solexa_quality_str
tuple Bio.SeqIO.QualityIO._phred_to_solexa_quality_str